{ "_id": "6aca687ffe5cc25786e889d6", "Package": "tdsa", "Version": "1.1-2", "Date": "2026-01-27", "Title": "Time-Dependent Sensitivity Analysis", "Authors@R": "c(person(\"Wee Hao\", \"Ng\", role = c(\"aut\", \"cre\"),\nemail = \"wn68@cornell.edu\",\ncomment = c(ORCID = \"0000-0002-5738-4960\")),\nperson(\"Christopher R.\", \"Myers\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-2294-2416\")),\nperson(\"Scott H.\", \"McArt\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0001-7157-9011\")),\nperson(\"Stephen P.\", \"Ellner\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-8351-9734\")))", "RdMacros": "mathjaxr", "VignetteBuilder": "knitr", "Description": "Functions that can be used to calculate time-dependent\nstate and parameter sensitivities for both continuous- and\ndiscrete-time deterministic models. See Ng et al. (2023)\n for more information about time-dependent\nsensitivity analysis.", "License": "GPL-3", "URL": "https://github.com/weehaong/tdsa", "BugReports": "https://github.com/weehaong/tdsa/issues", "Repository": "https://weehaong.r-universe.dev", "Date/Publication": "2026-01-27 16:06:47 UTC", "RemoteUrl": "https://github.com/weehaong/tdsa", "RemoteRef": "HEAD", "RemoteSha": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 15:31:34 UTC", "User": "root" }, "Author": "Wee Hao Ng [aut, cre] (ORCID: ),\nChristopher R. Myers [ctb] (ORCID:\n),\nScott H. McArt [ctb] (ORCID: ),\nStephen P. Ellner [ctb] (ORCID:\n)", "Maintainer": "Wee Hao Ng ", "_user": "weehaong", "_type": "src", "_file": "tdsa_1.1-2.tar.gz", "_fileid": "https://r2.ropensci.org/3d172b5fc0516fd624e46758d7e5cd185d1005a3a7808607c2931f9aceafafbd", "_filesize": 1367199, "_sha256": "3d172b5fc0516fd624e46758d7e5cd185d1005a3a7808607c2931f9aceafafbd", "_expires": "2027-01-18T16:31:57.000Z", "_created": "2026-10-10T15:31:34.000Z", "_published": "2026-10-10T16:31:59.489Z", "_buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 114247801917, "time": 95, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11674135927" }, { "job": 114247801923, "time": 94, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11673914637" }, { "job": 114247801847, "time": 179, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11675771481" }, { "job": 114247801857, "time": 126, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11675337048" }, { "job": 114247223123, "time": 166, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11673764689" }, { "job": 114247801845, "time": 78, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11673899667" }, { "job": 114247801878, "time": 81, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11674091807" }, { "job": 114247801864, "time": 62, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11674320645" }, { "job": 114247801861, "time": 77, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11673714870" } ], "_upstream": "https://github.com/weehaong/tdsa", "_commit": { "id": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "author": "weehaong ", "committer": "weehaong ", "message": "Updated mathjaxr requirement\n", "time": 1769530007 }, "_maintainer": { "name": "Wee Hao Ng", "email": "wn68@cornell.edu", "login": "weehaong", "description": "", "uuid": 127782450, "orcid": "0000-0002-5738-4960" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "deSolve", "version": ">= 1.10-6", "role": "Imports" }, { "package": "mathjaxr", "version": ">= 2.0-0", "role": "Imports" }, { "package": "numDeriv", "version": ">= 2006.4-1", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "tinytest", "role": "Suggests" } ], "_owner": "weehaong", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-05", "n": 1 } ], "_tags": [ { "name": "v1.1-2", "date": "2026-01-27" } ], "_stars": 0, "_contributors": [ { "user": "weehaong", "count": 19, "uuid": 127782450 } ], "_userbio": { "uuid": 127782450, "type": "user", "name": "weehaong", "followers": 0 }, "_downloads": { "count": 228, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/tdsa" }, "_devurl": "https://github.com/weehaong/tdsa", "_searchresults": 12, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/tdsa.html" ], "_homeurl": "https://github.com/weehaong/tdsa", "_realowner": "weehaong", "_cranurl": true, "_releases": [ { "version": "1.0-0", "date": "2023-04-20" }, { "version": "1.0-1", "date": "2023-04-25" }, { "version": "1.1-0", "date": "2023-09-10" }, { "version": "1.1-1", "date": "2025-05-15" }, { "version": "1.1-2", "date": "2026-02-07" } ], "_exports": [ "parm_sens", "state_sens" ], "_help": [ { "page": "parm_sens", "title": "Time-Dependent Parameter Sensitivities", "topics": [ "parm_sens" ] }, { "page": "state_sens", "title": "Time-Dependent State Sensitivities", "topics": [ "state_sens" ] } ], "_readme": "https://github.com/weehaong/tdsa/raw/HEAD/README.md", "_rundeps": [ "deSolve", "mathjaxr", "numDeriv" ], "_vignettes": [ { "source": "V02_demo_translocation.Rmd", "filename": "V02_demo_translocation.html", "title": "Using the tdsa package for time-dependent sensitivity analysis: a basic example", "engine": "knitr::rmarkdown", "headings": [ "Translocating individuals into a sink habitat that is being restored", "Background", "Installing and loading the tdsa package", "Preparing the input arguments", "Calculating time-dependent state sensitivities", "Calculating time-dependent parameter sensitivities", "Bibliography" ], "created": "2023-08-31 12:49:17", "modified": "2025-05-15 16:30:21", "commits": 2 }, { "source": "V03_demo_spillover.Rmd", "filename": "V03_demo_spillover.html", "title": "Using the tdsa package for time-dependent sensitivity analysis: a more complicated example", "engine": "knitr::rmarkdown", "headings": [ "Exogenous disease spillover in a linear network", "Background", "Installing and loading the tdsa package", "Preparing the input arguments", "Calculating time-dependent state sensitivities", "Calculating time-dependent parameter sensitivities", "Bibliography" ], "created": "2023-08-31 12:49:17", "modified": "2025-05-15 16:30:21", "commits": 2 }, { "source": "V01_theory.Rmd", "filename": "V01_theory.html", "title": "What is time-dependent sensitivity analysis (TDSA)?", "engine": "knitr::rmarkdown", "headings": [ "The mathematics of TDSA", "The setup", "Time-dependent state sensitivity", "Time-dependent parameter sensitivity", "A simple example", "The tdsa package", "Best practices", "Bibliography" ], "created": "2023-08-31 12:49:17", "modified": "2025-05-15 16:30:21", "commits": 2 } ], "_score": 4.2552725051033065, "_indexed": true, "_nocasepkg": "tdsa", "_universes": [ "weehaong" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1-2", "date": "2026-10-10T15:33:16.000Z", "distro": "resolute", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/8db04a53118fbcff67ae1152fa4789405feac68202c625d96097f377c145aaa3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.6.1", "os": "linux", "version": "1.1-2", "date": "2026-10-10T15:33:09.000Z", "distro": "resolute", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/2390319e00e5eb8ac4d5ac3f70b4e6a215fb76e14c5b6874a9d35e4f7d059e7b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.5.3", "os": "mac", "version": "1.1-2", "date": "2026-10-10T16:30:50.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/128887e5d22939f8206cbf82ba06ae4b7f9eee7db62817cdacde7eb9587f41f0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.6.1", "os": "mac", "version": "1.1-2", "date": "2026-10-10T16:28:09.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/f5d799591b5f452cf33a31a6bcf92f1d00e6901e9f35467183a1fc3b8b2864b1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.6.0", "os": "wasm", "version": "1.1-2", "date": "2026-10-10T15:33:10.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/f5fca249d84b8ce49fa3c8cea602cebde2efd60878ce7f896c904e568e3f7899", "status": "success", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.7.0", "os": "win", "version": "1.1-2", "date": "2026-10-10T15:32:48.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/4529ef39dd5f7ef03bec15e9e961ae3510f8b2d711289e9c7c1847b2549f675e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.5.3", "os": "win", "version": "1.1-2", "date": "2026-10-10T15:32:32.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/970692e76a6886130133dff8d93141f20fd1bc09465c26f304f6333751b06094", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" }, { "r": "4.6.1", "os": "win", "version": "1.1-2", "date": "2026-10-10T15:32:44.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "https://r2.ropensci.org/d5603c3206105728083a7316a1feaf7e88c79c9eb7620f43740104891bfdeb32", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/38063766887" } ] }