{ "_id": "6a169fb9acfb0bcc41d804c1", "Package": "tdsa", "Version": "1.1-2", "Date": "2026-01-27", "Title": "Time-Dependent Sensitivity Analysis", "Authors@R": "c(person(\"Wee Hao\", \"Ng\", role = c(\"aut\", \"cre\"),\nemail = \"wn68@cornell.edu\",\ncomment = c(ORCID = \"0000-0002-5738-4960\")),\nperson(\"Christopher R.\", \"Myers\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-2294-2416\")),\nperson(\"Scott H.\", \"McArt\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0001-7157-9011\")),\nperson(\"Stephen P.\", \"Ellner\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-8351-9734\")))", "RdMacros": "mathjaxr", "VignetteBuilder": "knitr", "Description": "Functions that can be used to calculate time-dependent\nstate and parameter sensitivities for both continuous- and\ndiscrete-time deterministic models. See Ng et al. (2023)\n for more information about time-dependent\nsensitivity analysis.", "License": "GPL-3", "URL": "https://github.com/weehaong/tdsa", "BugReports": "https://github.com/weehaong/tdsa/issues", "Repository": "https://weehaong.r-universe.dev", "Date/Publication": "2026-01-27 16:06:47 UTC", "RemoteUrl": "https://github.com/weehaong/tdsa", "RemoteRef": "HEAD", "RemoteSha": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-27 07:35:40 UTC", "User": "root" }, "Author": "Wee Hao Ng [aut, cre] (ORCID: ),\nChristopher R. Myers [ctb] (ORCID:\n),\nScott H. McArt [ctb] (ORCID: ),\nStephen P. Ellner [ctb] (ORCID:\n)", "Maintainer": "Wee Hao Ng ", "MD5sum": "0c81da36e902f5e896c7f244852a716f", "_user": "weehaong", "_type": "src", "_file": "tdsa_1.1-2.tar.gz", "_fileid": "f1fedaf1c16adbbb858f1d7f28ca03e0380e562596afc6f17d3cd982f1ee8816", "_filesize": 1368507, "_sha256": "f1fedaf1c16adbbb858f1d7f28ca03e0380e562596afc6f17d3cd982f1ee8816", "_created": "2026-05-27T07:35:40.000Z", "_published": "2026-05-27T07:39:37.293Z", "_distro": "noble", "_jobs": [ { "job": 78029575536, "time": 118, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7234578363" }, { "job": 78029575552, "time": 107, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7234574836" }, { "job": 78029575558, "time": 143, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7234590576" }, { "job": 78029575565, "time": 150, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7234597408" }, { "job": 78029136667, "time": 174, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7234539485" }, { "job": 78029575539, "time": 88, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7234569116" }, { "job": 78029575597, "time": 98, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7234571732" }, { "job": 78029575566, "time": 80, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7234566365" }, { "job": 78029575636, "time": 90, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7234569027" } ], "_buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/weehaong/tdsa", "_commit": { "id": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "author": "weehaong ", "committer": "weehaong ", "message": "Updated mathjaxr requirement\n", "time": 1769530007 }, "_maintainer": { "name": "Wee Hao Ng", "email": "wn68@cornell.edu", "login": "weehaong", "description": "", "uuid": 127782450, "orcid": "0000-0002-5738-4960" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "deSolve", "version": ">= 1.10-6", "role": "Imports" }, { "package": "mathjaxr", "version": ">= 2.0-0", "role": "Imports" }, { "package": "numDeriv", "version": ">= 2006.4-1", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "tinytest", "role": "Suggests" } ], "_owner": "weehaong", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-05", "n": 1 } ], "_tags": [ { "name": "v1.1-2", "date": "2026-01-27" } ], "_stars": 0, "_contributors": [ { "user": "weehaong", "count": 19, "uuid": 127782450 } ], "_userbio": { "uuid": 127782450, "type": "user", "name": "weehaong" }, "_downloads": { "count": 149, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/tdsa" }, "_devurl": "https://github.com/weehaong/tdsa", "_searchresults": 10, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/tdsa.html", "manual.pdf" ], "_homeurl": "https://github.com/weehaong/tdsa", "_realowner": "weehaong", "_cranurl": true, "_releases": [ { "version": "1.0-0", "date": "2023-04-20" }, { "version": "1.0-1", "date": "2023-04-25" }, { "version": "1.1-0", "date": "2023-09-10" }, { "version": "1.1-1", "date": "2025-05-15" }, { "version": "1.1-2", "date": "2026-02-07" } ], "_exports": [ "parm_sens", "state_sens" ], "_help": [ { "page": "parm_sens", "title": "Time-Dependent Parameter Sensitivities", "topics": [ "parm_sens" ] }, { "page": "state_sens", "title": "Time-Dependent State Sensitivities", "topics": [ "state_sens" ] } ], "_readme": "https://github.com/weehaong/tdsa/raw/HEAD/README.md", "_rundeps": [ "deSolve", "mathjaxr", "numDeriv" ], "_vignettes": [ { "source": "V02_demo_translocation.Rmd", "filename": "V02_demo_translocation.html", "title": "Using the tdsa package for time-dependent sensitivity analysis: a basic example", "engine": "knitr::rmarkdown", "headings": [ "Translocating individuals into a sink habitat that is being restored", "Background", "Installing and loading the tdsa package", "Preparing the input arguments", "Calculating time-dependent state sensitivities", "Calculating time-dependent parameter sensitivities", "Bibliography" ], "created": "2023-08-31 12:49:17", "modified": "2025-05-15 16:30:21", "commits": 2 }, { "source": "V03_demo_spillover.Rmd", "filename": "V03_demo_spillover.html", "title": "Using the tdsa package for time-dependent sensitivity analysis: a more complicated example", "engine": "knitr::rmarkdown", "headings": [ "Exogenous disease spillover in a linear network", "Background", "Installing and loading the tdsa package", "Preparing the input arguments", "Calculating time-dependent state sensitivities", "Calculating time-dependent parameter sensitivities", "Bibliography" ], "created": "2023-08-31 12:49:17", "modified": "2025-05-15 16:30:21", "commits": 2 }, { "source": "V01_theory.Rmd", "filename": "V01_theory.html", "title": "What is time-dependent sensitivity analysis (TDSA)?", "engine": "knitr::rmarkdown", "headings": [ "The mathematics of TDSA", "The setup", "Time-dependent state sensitivity", "Time-dependent parameter sensitivity", "A simple example", "The tdsa package", "Best practices", "Bibliography" ], "created": "2023-08-31 12:49:17", "modified": "2025-05-15 16:30:21", "commits": 2 } ], "_score": 4.176091259055681, "_indexed": true, "_nocasepkg": "tdsa", "_universes": [ "weehaong" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1-2", "date": "2026-05-27T07:37:46.000Z", "distro": "noble", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "68ca85369686bec54350558744ea5cc2b764ce49d5fa450b6e2892633c779348", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.6.0", "os": "linux", "version": "1.1-2", "date": "2026-05-27T07:37:32.000Z", "distro": "noble", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "1549b404a9cddb04db8ff076e31f383d93164e39cdda12e99766190bf6cfec52", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.5.3", "os": "mac", "version": "1.1-2", "date": "2026-05-27T07:38:26.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "8a406f97374670c8e511575c596759529c1ec904b54dc0f10bede45209d33acf", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.6.0", "os": "mac", "version": "1.1-2", "date": "2026-05-27T07:38:49.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "771db56cfe83c60d5b7fb9b285caf563e3704cb956c2d755dc63edcac8026b4f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.6.0", "os": "wasm", "version": "1.1-2", "date": "2026-05-27T07:37:32.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "8faa943161822965f182ecf8d317e42de71668e9da27bb6ef0937f8ef660e730", "status": "success", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.7.0", "os": "win", "version": "1.1-2", "date": "2026-05-27T07:37:16.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "290b64ffcfdab0cb3161ecc7c6e0a08dd71e48f9469c4c4669b416693cbcf90b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.5.3", "os": "win", "version": "1.1-2", "date": "2026-05-27T07:37:01.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "f04887eb739004cee39de063503167d5c191e697d31f9e8a4d91d3dfa12d2d59", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" }, { "r": "4.6.0", "os": "win", "version": "1.1-2", "date": "2026-05-27T07:37:12.000Z", "commit": "faa8dccfaf5ceb20278e83f54ff64405a6b5c8b5", "fileid": "e60410041e487ffa90cb2e85f5cf20eceaade98d78dcd89ad5bb018ec6c5ec59", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/weehaong/actions/runs/26497461895" } ] }